Transcript: lnc-PASD1-1:2

Basic information

LNCipedia transcript ID: lnc-PASD1-1:2 
LNCipedia gene ID: lnc-PASD1-1
RefSeq ID: NR_135614
Location (hg38): chrX:151515551-151516262
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 499 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135614.1
Alternative gene names: LOC105377213


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -121.5318 non-coding 
CPAT coding probability 2.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PASD1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-MAGEA11-19:2
5.1 lnc-MAGEA11-19:2
5.2 lnc-PASD1-1:2