Transcript: lnc-PARN-13:1

Basic information

LNCipedia transcript ID: lnc-PARN-13:1 
LNCipedia gene ID: lnc-PARN-13
Location (hg38): chr16:13916933-13920905
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 396 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_1276_chr16:14010789-14014762_colon
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -168.167 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PARN-13:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PARN-13:1
4.0 lnc-PARN-13:1
4.1 lnc-PARN-13:1
5.0 lnc-PARN-13:1
5.1 lnc-PARN-13:1
5.2 lnc-PARN-13:1