Transcript: lnc-PAPD7-2:4

Basic information

LNCipedia transcript ID: lnc-PAPD7-2:4 
LNCipedia gene ID: lnc-PAPD7-2
Location (hg38): chr5:6775650-6777356
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 512 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT147317
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 77.234 coding 
CPAT coding probability 44.92% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PAPD7-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PAPD7-2:4
4.0 lnc-PAPD7-2:4
4.1 lnc-PAPD7-2:4
5.0 lnc-PAPD7-2:4
5.1 lnc-CARD6-323:11
5.2 lnc-PAPD7-2:4