Transcript: lnc-PAPD7-2:11

Basic information

LNCipedia transcript ID: lnc-PAPD7-2:11 
LNCipedia gene ID: lnc-PAPD7-2
Location (hg38): chr5:6765915-6788461
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 882 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000251365.1|ENCT00000342079.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 77.234 coding 
CPAT coding probability 24.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PAPD7-2:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PAPD7-2:11
5.0 lnc-PAPD7-2:11
5.1 lnc-CARD6-323:8
5.2 lnc-PAPD7-2:11