Transcript: lnc-PAN2-1:3

Basic information

LNCipedia transcript ID: lnc-PAN2-1:3 
LNCipedia gene ID: lnc-PAN2-1
Location (hg38): chr12:56314490-56315750
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 624 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT028810
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 106.6412 coding 
CPAT coding probability 34.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PAN2-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-977G19.10.1-1:3
4.0 lnc-RP11-977G19.10.1-1:3
4.1 lnc-RP11-977G19.10.1-1:3
5.0 lnc-RP11-977G19.10.1-1:3
5.1 lnc-PMEL-29:3
5.2 lnc-PAN2-1:3