Transcript: lnc-PAICS-3:5

Basic information

LNCipedia transcript ID: lnc-PAICS-3:5 
LNCipedia gene ID: lnc-PAICS-3
Location (hg38): chr4:56387223-56393461
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4885 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000269921.1|MICT00000265102.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.5644 non-coding 
CPAT coding probability 0.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PAICS-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PAICS-3:5
5.0 lnc-PAICS-3:5
5.1 lnc-CEP135-9:3
5.2 lnc-PAICS-3:5