Transcript: lnc-PACRGL-3:2

Basic information

LNCipedia transcript ID: lnc-PACRGL-3:2 
LNCipedia gene ID: lnc-PACRGL-3
RefSeq ID: NR_134233
Location (hg38): chr4:21582096-21613722
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 715 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134233.1
Alternative gene names: LOC105374516


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -167.1999 non-coding 
CPAT coding probability 3.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PACRGL-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-USP17L28-78:2
5.1 lnc-USP17L28-78:2
5.2 lnc-PACRGL-3:2