Transcript: lnc-PABPC4L-6:1

Basic information

LNCipedia transcript ID: lnc-PABPC4L-6:1 
LNCipedia gene ID: lnc-PABPC4L-6
Location (hg38): chr4:133261642-133263115
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 840 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000073817.1|FTMT21300031897.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 33.3004 non-coding 
CPAT coding probability 2.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PABPC4L-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-62N21.1.1-6:3
5.0 lnc-RP11-62N21.1.1-6:3
5.1 lnc-CLGN-59:1
5.2 lnc-PABPC4L-6:1