Transcript: lnc-PABPC4-1:6

Basic information

LNCipedia transcript ID: lnc-PABPC4-1:6 
LNCipedia gene ID: lnc-PABPC4-1
Location (hg38): chr1:39531838-39558707
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 813 bp
Exons: 7
Sources: NONCODE v4
Alternative transcript names: NONHSAT002574
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.2813 non-coding 
CPAT coding probability 48.97% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PABPC4-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PABPC4-1:6
4.0 lnc-PABPC4-1:6
4.1 lnc-PABPC4-1:6
5.0 lnc-PABPC4-1:6
5.1 lnc-PABPC4-1:6
5.2 lnc-PABPC4-1:6