Transcript: lnc-ORC5-1:1

Basic information

LNCipedia transcript ID: lnc-ORC5-1:1 
LNCipedia gene ID: lnc-ORC5-1
Location (hg38): chr7:104583745-104591320
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 947 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003vcg_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.4796 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ORC5-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ORC5-1:1
4.0 lnc-ORC5-1:1
4.1 lnc-ORC5-1:1
5.0 lnc-ORC5-1:1
5.1 lnc-POLR2J2-19:1
5.2 lnc-ORC5-1:1