Transcript: lnc-OR7C2-1:1

Basic information

LNCipedia transcript ID: lnc-OR7C2-1:1 
LNCipedia gene ID: lnc-OR7C2-1
Location (hg38): chr19:14939434-16638094
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 2927 bp
Exons: 9
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000499938
Alternative gene names: ENSG00000246896


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.3613 non-coding 
CPAT coding probability 0.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR7C2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-OR7C2-1:1
3.1 lnc-OR7C2-1:1
4.0 lnc-OR7C2-1:1
4.1 lnc-OR7C2-1:1
5.0 lnc-OR7C2-1:1
5.1 lnc-MAP1S-67:1
5.2 lnc-OR7C2-1:1