Transcript: lnc-OR4F5-11:2

Basic information

LNCipedia transcript ID: lnc-OR4F5-11:2 
LNCipedia gene ID: lnc-OR4F5-11
Location (hg38): chr1:369009-375647
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 426 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT000070
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.2095 non-coding 
CPAT coding probability 1.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR4F5-11:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OR4F16-11:2
4.0 lnc-OR4F16-11:2
4.1 lnc-OR4F16-11:2
5.0 lnc-OR4F16-11:2
5.1 lnc-VAMP3-141:2
5.2 lnc-OR4F5-11:2