Transcript: lnc-OR4F29-1:29

Basic information

LNCipedia transcript ID: lnc-OR4F29-1:29 
LNCipedia gene ID: lnc-OR4F29-1
Location (hg38): chr1:497275-498976
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 603 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016
Alternative transcript names: ENST00000616947.2
Alternative gene names: ENSG00000237094.11; RP4-669L17.10


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 32.4743 non-coding 
CPAT coding probability 3.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR4F29-1:29 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC138035.1-2:7
4.1 lnc-AC138035.1-2:7
5.0 lnc-AC138035.1-2:7
5.1 lnc-CLSTN1-177:8
5.2 lnc-OR4F29-1:29