Transcript: lnc-OLR1-1:1

Basic information

LNCipedia transcript ID: lnc-OLR1-1:1 
LNCipedia gene ID: lnc-OLR1-1
Location (hg38): chr12:10179032-10190108
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 552 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000541344.1; RP11-656E20.3-001; OTTHUMT00000400105.1; NONHSAT026869
Alternative gene names: ENSG00000255895.1; RP11-656E20.3; OTTHUMG00000168528.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -180.6811 non-coding 
CPAT coding probability 1.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OLR1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OLR1-1:1
4.0 lnc-OLR1-1:1
4.1 lnc-OLR1-1:1
5.0 lnc-OLR1-1:1
5.1 lnc-M6PR-32:1
5.2 lnc-OLR1-1:1