Transcript: lnc-OLFM4-4:6

Basic information

LNCipedia transcript ID: lnc-OLFM4-4:6 
LNCipedia gene ID: lnc-OLFM4-4
Location (hg38): chr13:54334760-54353443
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 723 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000014904.1|FTMT25100015312.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -168.6517 non-coding 
CPAT coding probability 3.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OLFM4-4:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-OLFM4-4:6
5.0 lnc-OLFM4-4:6
5.1 lnc-KL-235:5
5.2 lnc-OLFM4-4:6