Transcript: lnc-OAZ3-3:1

Basic information

LNCipedia transcript ID: lnc-OAZ3-3:1 
LNCipedia gene ID: lnc-OAZ3-3
Ensembl Gene ID: ENSG00000229021
Ensembl Transcript ID: ENST00000432386
Location (hg38): chr1:151994531-152042774
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4109 bp
Exons: 13
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000432386.1; AL591893.1-001; OTTHUMT00000036629.1; NONHSAT006457
Alternative gene names: ENSG00000229021.2; AL591893.1; OTTHUMG00000013054.1; NBPF18P; AL450992.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.6358 non-coding 
CPAT coding probability 11.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OAZ3-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OAZ3-3:1
4.0 lnc-OAZ3-3:1
4.1 lnc-OAZ3-3:1
5.0 lnc-OAZ3-3:1
5.1 lnc-LCE3C-6:2
5.2 lnc-OAZ3-3:1