Transcript: lnc-OAF-4:10

Basic information

LNCipedia transcript ID: lnc-OAF-4:10 
LNCipedia gene ID: lnc-OAF-4
Location (hg38): chr11:119938080-119939926
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 515 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019501; NONHSAT024694
Alternative gene names: XLOC_009302; linc-OAF-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -79.2245 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OAF-4:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CTD-2523D13.1.1-4:1
3.1 lnc-CTD-2523D13.1.1-5:1
4.0 lnc-CTD-2523D13.1.1-5:1
4.1 lnc-CTD-2523D13.1.1-4:10
5.0 lnc-CTD-2523D13.1.1-4:10
5.1 lnc-HINFP-12:10
5.2 lnc-OAF-4:10