Transcript: lnc-NXPE4-4:1

Basic information

LNCipedia transcript ID: lnc-NXPE4-4:1 
LNCipedia gene ID: lnc-NXPE4-4
Location (hg38): chr11:115399084-115504415
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 575 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT024307
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 173.2589 coding 
CPAT coding probability 21.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NXPE4-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM55D-4:1
4.0 lnc-FAM55D-4:1
4.1 lnc-FAM55D-4:1
5.0 lnc-FAM55D-4:1
5.1 lnc-DRD2-35:1
5.2 lnc-NXPE4-4:1