Transcript: lnc-NXPE2-5:2

Basic information

LNCipedia transcript ID: lnc-NXPE2-5:2 
LNCipedia gene ID: lnc-NXPE2-5
Location (hg38): chr11:115582306-115600339
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 367 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000255689.1|ENST00000306533.8
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 12.6189 non-coding 
CPAT coding probability 0.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NXPE2-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM55B-5:2
5.0 lnc-FAM55B-5:2
5.1 lnc-PTS-53:2
5.2 lnc-NXPE2-5:2