Transcript: lnc-NUP107-26:1

Basic information

LNCipedia transcript ID: lnc-NUP107-26:1 
LNCipedia gene ID: lnc-NUP107-26
Location (hg38): chr12:68266183-68793963
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 1663 bp
Exons: 3
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000504589
Alternative gene names: ENSG00000251695


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -26.2384 non-coding 
CPAT coding probability 9.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NUP107-26:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC124890.1-1:1
3.1 lnc-AC124890.1-1:1
4.0 lnc-AC124890.1-1:1
4.1 lnc-AC124890.1-1:1
5.0 lnc-AC124890.1-1:1
5.1 lnc-NUP107-5:1
5.2 lnc-NUP107-26:1