Transcript: lnc-NUDT12-3:3

Basic information

LNCipedia transcript ID: lnc-NUDT12-3:3 
LNCipedia gene ID: lnc-NUDT12-3
Location (hg38): chr5:103880644-103887175
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1482 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011011; NONHSAT103069
Alternative gene names: XLOC_004945; linc-NUDT12-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -261.1726 non-coding 
CPAT coding probability 0.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NUDT12-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NUDT12-3:3
3.1 lnc-NUDT12-3:3
4.0 lnc-NUDT12-3:3
4.1 lnc-NUDT12-3:3
5.0 lnc-NUDT12-3:3
5.1 lnc-LOX-167:10
5.2 lnc-NUDT12-3:3