Transcript: lnc-NTF3-3:11

Basic information

LNCipedia transcript ID: lnc-NTF3-3:11 
LNCipedia gene ID: lnc-NTF3-3
Location (hg38): chr12:5520125-5523966
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3300 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020284; NONHSAT026011
Alternative gene names: XLOC_009628; linc-CD9-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.6616 non-coding 
CPAT coding probability 6.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NTF3-3:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NTF3-1:3
3.1 lnc-KCNA5-3:3
4.0 lnc-NTF3-3:11
4.1 lnc-NTF3-3:11
5.0 lnc-NTF3-3:11
5.1 lnc-CLEC4D-90:6
5.2 lnc-NTF3-3:11