Transcript: lnc-NT5E-10:3

Basic information

LNCipedia transcript ID: lnc-NT5E-10:3 
LNCipedia gene ID: lnc-NT5E-10
Location (hg38): chr6:85008871-85017211
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1655 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000084686.1|MICT00000307526.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.3515 non-coding 
CPAT coding probability 11.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NT5E-10:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NT5E-10:3
5.0 lnc-NT5E-10:3
5.1 lnc-CYB5R4-12:3
5.2 lnc-NT5E-10:3