Transcript: lnc-NRK-1:2

Basic information

LNCipedia transcript ID: lnc-NRK-1:2 
LNCipedia gene ID: lnc-NRK-1
Location (hg38): chrX:106008204-106009339
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 473 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT138099; FPKM1_group_34991_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -231.7287 non-coding 
CPAT coding probability 0.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NRK-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NRK-1:2
4.0 lnc-NRK-1:2
4.1 lnc-NRK-1:2
5.0 lnc-NRK-1:2
5.1 lnc-TEX13C-216:1
5.2 lnc-NRK-1:2