Transcript: lnc-NR5A2-11:1

Basic information

LNCipedia transcript ID: lnc-NR5A2-11:1 
LNCipedia gene ID: lnc-NR5A2-11
Location (hg38): chr1:199666393-199668365
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 952 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_162_chr1:199635520-199637493_thyroid
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -118.0328 non-coding 
CPAT coding probability 0.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NR5A2-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NR5A2-11:1
4.0 lnc-NR5A2-11:1
4.1 lnc-NR5A2-11:1
5.0 lnc-NR5A2-11:1
5.1 lnc-CFHR3-37:1
5.2 lnc-NR5A2-11:1