Transcript: lnc-NR2F6-5:1

Basic information

LNCipedia transcript ID: lnc-NR2F6-5:1 
LNCipedia gene ID: lnc-NR2F6-5
Location (hg38): chr19:17209584-17215265
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5682 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000040459.1|HBMT00000732536.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 100.2779 coding 
CPAT coding probability 21.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NR2F6-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NR2F6-5:1
5.0 lnc-NR2F6-5:1
5.1 lnc-PALM3-94:1
5.2 lnc-NR2F6-5:1