Transcript: lnc-NPR2-1:4

Basic information

LNCipedia transcript ID: lnc-NPR2-1:4 
LNCipedia gene ID: lnc-NPR2-1
Location (hg38): chr9:35762175-35780419
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1238 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_3758_chr9:35762171-35776693_colon
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -19.9129 non-coding 
CPAT coding probability 2.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NPR2-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NPR2-1:4
4.0 lnc-NPR2-1:4
4.1 lnc-NPR2-1:4
5.0 lnc-NPR2-1:4
5.1 lnc-RECK-8:1
5.2 lnc-NPR2-1:4