Transcript: lnc-NPHP3-ACAD11-1:2

Basic information

LNCipedia transcript ID: lnc-NPHP3-ACAD11-1:2 
LNCipedia gene ID: lnc-NPHP3-ACAD11-1
Location (hg38): chr3:133033874-133038158
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 3484 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000066135.1|MICT00000250813.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -83.3497 non-coding 
CPAT coding probability 0.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NPHP3-ACAD11-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NPHP3-1:3
5.0 lnc-NPHP3-1:3
5.1 lnc-RYK-12:2
5.2 lnc-NPHP3-ACAD11-1:2