Transcript: lnc-NPEPPS-2:1

Basic information

LNCipedia transcript ID: lnc-NPEPPS-2:1 
LNCipedia gene ID: lnc-NPEPPS-2
Location (hg38): chr17:47423477-47426690
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3214 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT054304
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.9213 non-coding 
CPAT coding probability 86.13% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NPEPPS-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ITGB3-2:1
4.0 lnc-RP11-290H9.2.1-2:1
4.1 lnc-RP11-290H9.2.1-2:1
5.0 lnc-RP11-290H9.2.1-2:1
5.1 lnc-CCDC103-80:1
5.2 lnc-NPEPPS-2:1