Transcript: lnc-NOCT-10:3

Basic information

LNCipedia transcript ID: lnc-NOCT-10:3 
LNCipedia gene ID: lnc-NOCT-10
Location (hg38): chr4:137483769-137484358
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 269 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008259; NONHSAT098394
Alternative gene names: XLOC_003701; linc-CCRN4L-10


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.6139 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NOCT-10:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CCRN4L-9:1
3.1 lnc-CCRN4L-10:1
4.0 lnc-CCRN4L-10:1
4.1 lnc-CCRN4L-10:1
5.0 lnc-CCRN4L-10:1
5.1 lnc-NOCT-11:1
5.2 lnc-NOCT-10:3