Transcript: lnc-NOC4L-4:15

Basic information

LNCipedia transcript ID: lnc-NOC4L-4:15 
LNCipedia gene ID: lnc-NOC4L-4
Ensembl Gene ID: ENSG00000256542
Ensembl Transcript ID: ENST00000537762
Location (hg38): chr12:132277349-132280900
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3039 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000537762.2
Alternative gene names: ENSG00000256542.2; RP13-895J2.3; AC148477.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 44.6723 non-coding 
CPAT coding probability 14.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NOC4L-4:15 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-FBRSL1-4:10
4.1 lnc-FBRSL1-4:10
5.0 lnc-FBRSL1-4:10
5.1 lnc-NOC4L-5:11
5.2 lnc-NOC4L-4:15