Transcript: lnc-NME4-1:4

Basic information

LNCipedia transcript ID: lnc-NME4-1:4 
LNCipedia gene ID: lnc-NME4-1
Location (hg38): chr16:382323-383679
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 405 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024792; NONHSAT051765
Alternative gene names: XLOC_011618; linc-NME4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -118.181 non-coding 
CPAT coding probability 7.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NME4-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NME4-1:2
3.1 lnc-NME4-1:4
4.0 lnc-NME4-1:4
4.1 lnc-NME4-1:4
5.0 lnc-NME4-1:4
5.1 lnc-DNASE1L2-113:6
5.2 lnc-NME4-1:4