Transcript: lnc-NLRP12-1:9

Basic information

LNCipedia transcript ID: lnc-NLRP12-1:9 
LNCipedia gene ID: lnc-NLRP12-1
Location (hg38): chr19:53867894-53875992
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 7895 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232220.2|HBMT00000744163.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 96.3828 coding 
CPAT coding probability 14.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NLRP12-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NLRP12-1:9
5.0 lnc-NLRP12-1:9
5.1 lnc-TMC4-25:3
5.2 lnc-NLRP12-1:9