Transcript: lnc-NKPD1-1:2

Basic information

LNCipedia transcript ID: lnc-NKPD1-1:2 
LNCipedia gene ID: lnc-NKPD1-1
Ensembl Gene ID: ENSG00000267044
Ensembl Transcript ID: ENST00000591432
Location (hg38): chr19:45135993-45136977
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 472 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT066762; ENST00000591432.1
Alternative gene names: ENSG00000267044.1; AC005757.6; AC005757.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.8712 non-coding 
CPAT coding probability 5.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NKPD1-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NKPD1-1:2
4.0 lnc-NKPD1-1:2
4.1 lnc-NKPD1-1:2
5.0 lnc-NKPD1-1:2
5.1 lnc-GPR4-16:2
5.2 lnc-NKPD1-1:2