Transcript: lnc-NGEF-2:2

Basic information

LNCipedia transcript ID: lnc-NGEF-2:2 
LNCipedia gene ID: lnc-NGEF-2
Location (hg38): chr2:233176720-233180112
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 795 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000051921.1|ENCT00000254806.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -21.3062 non-coding 
CPAT coding probability 2.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NGEF-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NGEF-2:2
5.0 lnc-NGEF-2:2
5.1 lnc-NCL-21:4
5.2 lnc-NGEF-2:2