Transcript: lnc-NETO1-1:9

Basic information

LNCipedia transcript ID: lnc-NETO1-1:9 
LNCipedia gene ID: lnc-NETO1-1
Ensembl Gene ID: ENSG00000263711
Ensembl Transcript ID: ENST00000584544
Location (hg38): chr18:73151241-73264303
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1396 bp
Exons: 10
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000507480; ENST00000584544.5
Alternative gene names: ENSG00000251565; AC079062.1; ENSG00000263711.5; RP11-169F17.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.8547 non-coding 
CPAT coding probability 5.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NETO1-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NETO1-1:9
3.1 lnc-NETO1-1:9
4.0 lnc-NETO1-1:9
4.1 lnc-NETO1-1:9
5.0 lnc-NETO1-1:9
5.1 lnc-PQLC1-63:18
5.2 lnc-NETO1-1:9