Transcript: lnc-NETO1-1:3

Basic information

LNCipedia transcript ID: lnc-NETO1-1:3 
LNCipedia gene ID: lnc-NETO1-1
Location (hg38): chr18:73154059-73264480
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2635 bp
Exons: 6
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000515473
Alternative gene names: ENSG00000251565; AC079062.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.2027 non-coding 
CPAT coding probability 2.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NETO1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NETO1-1:3
3.1 lnc-NETO1-1:3
4.0 lnc-NETO1-1:3
4.1 lnc-NETO1-1:3
5.0 lnc-NETO1-1:3
5.1 lnc-PQLC1-63:7
5.2 lnc-NETO1-1:3