Transcript: lnc-NEGR1-4:2

Basic information

LNCipedia transcript ID: lnc-NEGR1-4:2 
LNCipedia gene ID: lnc-NEGR1-4
Location (hg38): chr1:72470059-72537525
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 806 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_72_chr1:72935741-72937450_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -106.7633 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NEGR1-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NEGR1-4:2
4.0 lnc-NEGR1-4:2
4.1 lnc-NEGR1-4:2
5.0 lnc-NEGR1-4:2
5.1 lnc-SERBP1-38:2
5.2 lnc-NEGR1-4:2