Transcript: lnc-NDFIP2-30:1

Basic information

LNCipedia transcript ID: lnc-NDFIP2-30:1 
LNCipedia gene ID: lnc-NDFIP2-30
Location (hg38): chr13:83496732-83516797
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2662 bp
Exons: 6
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT034540; FPKM1_group_8211_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -94.3821 non-coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NDFIP2-30:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NDFIP2-30:1
4.0 lnc-NDFIP2-30:1
4.1 lnc-NDFIP2-30:1
5.0 lnc-NDFIP2-30:1
5.1 lnc-COL4A2-185:1
5.2 lnc-NDFIP2-30:1