Transcript: lnc-NCOA1-4:4

Basic information

LNCipedia transcript ID: lnc-NCOA1-4:4 
LNCipedia gene ID: lnc-NCOA1-4
Location (hg38): chr2:24360672-24401049
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1249 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000042127.1|MICT00000186173.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -2.4531 non-coding 
CPAT coding probability 1.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NCOA1-4:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NCOA1-4:4
5.0 lnc-NCOA1-4:4
5.1 lnc-SNX17-52:4
5.2 lnc-NCOA1-4:4