Transcript: lnc-NCALD-1:3

Basic information

LNCipedia transcript ID: lnc-NCALD-1:3 
LNCipedia gene ID: lnc-NCALD-1
Location (hg38): chr8:101461142-101492620
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 647 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000254024.1|FTMT22900011051.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -117.2336 non-coding 
CPAT coding probability 1.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NCALD-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NCALD-1:3
5.0 lnc-NCALD-1:3
5.1 lnc-ZNF706-18:2
5.2 lnc-NCALD-1:3