Transcript: lnc-NBPF9-7:3

Basic information

LNCipedia transcript ID: lnc-NBPF9-7:3 
LNCipedia gene ID: lnc-NBPF9-7
Location (hg38): chr1:149115797-149124704
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 595 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000015945.1|MICT00000018985.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1.1158 non-coding 
CPAT coding probability 3.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NBPF9-7:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AL592284.1-7:4
5.0 lnc-AL592284.1-7:4
5.1 lnc-PPIAL4G-44:2
5.2 lnc-NBPF9-7:3