Transcript: lnc-NBPF3-11:1

Basic information

LNCipedia transcript ID: lnc-NBPF3-11:1 
LNCipedia gene ID: lnc-NBPF3-11
Location (hg38): chr1:21345674-21348683
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1852 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000047281.1|MICT00000005063.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.0407 non-coding 
CPAT coding probability 1.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NBPF3-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NBPF3-11:1
5.0 lnc-NBPF3-11:1
5.1 lnc-NBPF3-11:1
5.2 lnc-NBPF3-11:1