Transcript: lnc-NBPF11-1:38

Basic information

LNCipedia transcript ID: lnc-NBPF11-1:38 
LNCipedia gene ID: lnc-NBPF11-1
Location (hg38): chr1:148162787-148200553
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 691 bp
Exons: 6
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000443671.2
Alternative gene names: ENSG00000226335.2; XXyac-YX155B6.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.8504 non-coding 
CPAT coding probability 2.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NBPF11-1:38 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NBPF24-1:4
4.0 lnc-NBPF24-1:4
4.1 lnc-NBPF24-1:4
5.0 lnc-NBPF24-1:4
5.1 lnc-PPIAL4G-29:37
5.2 lnc-NBPF11-1:38