Transcript: lnc-NBPF11-1:26

Basic information

LNCipedia transcript ID: lnc-NBPF11-1:26 
LNCipedia gene ID: lnc-NBPF11-1
Location (hg38): chr1:148216835-148246638
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 516 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000074857.1|FTMT20100085180.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -31.276 non-coding 
CPAT coding probability 0.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NBPF11-1:26 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NBPF24-1:24
5.0 lnc-NBPF24-1:24
5.1 lnc-PPIAL4G-29:11
5.2 lnc-NBPF11-1:26