Transcript: lnc-NBPF1-2:10

Basic information

LNCipedia transcript ID: lnc-NBPF1-2:10 
LNCipedia gene ID: lnc-NBPF1-2
Location (hg38): chr1:16591863-16607083
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1084 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT001142
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -40.2145 non-coding 
CPAT coding probability 24.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NBPF1-2:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPATA21-2:15
4.0 lnc-SPATA21-2:15
4.1 lnc-SPATA21-2:15
5.0 lnc-SPATA21-2:15
5.1 lnc-LRRC38-44:10
5.2 lnc-NBPF1-2:10