Transcript: lnc-NBPF1-1:13

Basic information

LNCipedia transcript ID: lnc-NBPF1-1:13 
LNCipedia gene ID: lnc-NBPF1-1
Location (hg38): chr1:16618258-16631109
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1966 bp
Exons: 7
Sources: NONCODE v4
Alternative transcript names: NONHSAT001158
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 755.5392 coding 
CPAT coding probability 98.62% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NBPF1-1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MST1P9-2:12
4.0 lnc-MST1P9-2:12
4.1 lnc-MST1P9-2:12
5.0 lnc-MST1P9-2:12
5.1 lnc-LRRC38-45:13
5.2 lnc-NBPF1-1:13