Transcript: lnc-NBPF1-1:11

Basic information

LNCipedia transcript ID: lnc-NBPF1-1:11 
LNCipedia gene ID: lnc-NBPF1-1
Location (hg38): chr1:16631488-16633327
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 456 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT001167
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 76.1705 coding 
CPAT coding probability 86.61% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NBPF1-1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MST1P9-2:11
4.0 lnc-MST1P9-2:11
4.1 lnc-MST1P9-2:11
5.0 lnc-MST1P9-2:11
5.1 lnc-LRRC38-45:11
5.2 lnc-NBPF1-1:11