Transcript: lnc-NAXD-6:1

Basic information

LNCipedia transcript ID: lnc-NAXD-6:1 
LNCipedia gene ID: lnc-NAXD-6
Location (hg38): chr13:110561882-110563156
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 964 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000016265.1|FTMT25100013148.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.6983 non-coding 
CPAT coding probability 1.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NAXD-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CARKD-6:1
5.0 lnc-CARKD-6:1
5.1 lnc-COL4A2-6:2
5.2 lnc-NAXD-6:1