Transcript: lnc-NADSYN1-2:2

Basic information

LNCipedia transcript ID: lnc-NADSYN1-2:2 
LNCipedia gene ID: lnc-NADSYN1-2
Location (hg38): chr11:71284121-71288161
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4041 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA242:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.3187 non-coding 
CPAT coding probability 34.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NADSYN1-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-NADSYN1-2:2
4.1 lnc-NADSYN1-2:2
5.0 lnc-NADSYN1-2:2
5.1 lnc-TCIRG1-59:1
5.2 lnc-NADSYN1-2:2